BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G08LP1|AL425426
(1035 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1109 1206 0.0
>3x_Contig1109
Length = 3474
Score = 1206 bits (606), Expect = 0.0
Identities = 749/794 (94%), Gaps = 3/794 (0%)
Strand = Plus / Plus
Query: 1 agtggtgaagaagtcgctattaagtaagagccgattcgtacgaagcatcctcaattagac 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2683 agtggtgaagaagtcgctattaagttggagccgattcgtacgaagcatcctcaattagac 2742
Query: 61 tatgagtctcgagtwtataagtatttgagcggcggtattggaataccattcatcagatgg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 tatgagtctcgagtttataagtatttgagcggcggtattggaataccattcatcagatgg 2802
Query: 121 tttgggaaggaaggtgaatacaatgctatggtgatcgatcttttgggtccgtctttggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2803 tttgggaaggaaggtgaatacaatgctatggtgatcgatcttttgggtccgtctttggaa 2862
Query: 181 gatttatttaactattgtcataggaaattttcttttaagaccgtaatcatgcttgctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2863 gatttatttaactattgtcataggaaattttcttttaagaccgtaatcatgcttgctctg 2922
Query: 241 cagatgatctgtcgaatccaatacattcatggcagatctttcattcatagagatattaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2923 cagatgatctgtcgaatccaatacattcatggcagatctttcattcatagagatattaaa 2982
Query: 301 ccggacaatttcttgatgggtgtcggaagacgtggatccaccgtgcatgttattgatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2983 ccggacaatttcttgatgggtgtcggaagacgtggatccaccgtgcatgttattgatttt 3042
Query: 361 ggtttatccaagaagtatagagattttagaagtcataaccatatcccataccgagaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3043 ggtttatccaagaagtatagagattttagaagtcataaccatatcccataccgagaaaat 3102
Query: 421 aagaaccttactggtactgcacgttatgccagtgtcaatacgcatcttgggatcgaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3103 aagaaccttactggtactgcacgttatgccagtgtcaatacgcatcttgggatcgaacaa 3162
Query: 481 agtagacgtgacgatttggagagtttgggttacgtgttgatatatttctgcmaagggtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3163 agtagacgtgacgatttggagagtttgggttacgtgttgatatatttctgcaaagggtcc 3222
Query: 541 ttaccatggcaggggctcagagccacgacaaaaagacaaaaatacgaccgtatcatggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3223 ttaccatggcaggggctcagagccacgacaaaaagacaaaaatacgaccgtatcatggaa 3282
Query: 601 aagaaattgtgcatcaccgtcg-aacaactatgtcaaggtttacctatggaatttgttga 659
|||||||||||||||| || | ||| | | ||| ||||||| |||||| ||| ||||
Sbjct: 3283 aagaaattgtgcatcaaagtagtaacta-tttgtacaggtttaaatatggactttattga 3341
Query: 660 atacatgagatattgtaggaacctcagattcgatgaaagaccagattatatgtatttggc 719
||| ||||||||||||||||| || | || | || |||| ||||||||| || ||||
Sbjct: 3342 ataaatgagatattgtaggaaactacgtttaggtggaagaaaagattatatatacttgga 3401
Query: 720 tcgtttgttcaaggatttgttcatcaagttggaataccataatgatcatttgtttgattg 779
| ||||||| |||||||||| | |||||| || | |||||| | |||||||| |||
Sbjct: 3402 tagtttgttacaggatttgttactacagttgggctaacctaatgaccctttgtttgtttg 3461
Query: 780 gaccatgttgcgtt 793
|||| |||||||||
Sbjct: 3462 gacc-tgttgcgtt 3474
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7982
Number of Sequences: 1807
Number of extensions: 7982
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 1035
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1019
effective length of database: 10,329,639
effective search space: 10525902141
effective search space used: 10525902141
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)